Here’s a pretty good video about the different packaging formats on linux: https://piped.video/watch?v=ikBPnYwnUMU
What I wish I knew when i first installed a flatpak is that they, by default, do not have access to all the files in your file system. You can change their permissions with an app called flatseal (it should be available in the mint software app). Even then, I would avoid using them for things that need access to system files and libraries, such as IDEs.
the partition was still there, but if i tried to boot from it would just kick me back to the bios. unless there’s some obscure grub bug that happened to trigger exactly after i booted into windows i guess…
the fix was pretty simple, i just reinstalled grub from a live environment.